C-CoMP Collaboration Resources
Please browse this information to access C-CoMP collaboration resources. If you are interested in collaborating with C-CoMP beyond using these resources, please email contact_c-comp@whoi.edu with your query. Thanks!
C-CoMP Documentation
Marine Phytoplankton Strain Information
Marine phytoplankton can be ordered from the National Center for Marine Algae and Microbiota at Bigelow Laboratory.
Arrayed Mutant Libraries
A mutant library of bacterium Ruegeria pomeroyi DSS-3, a C-CoMP focal strain, was created by individually arraying random transposon mutants in multi-well plates. Visit the following link to access the catalog of arrayed mutants spreadsheet.
Pooled mutant libraries (i.e., a mixed pool of thousands of transposon mutants) are available for R. pomeroyi DSS-3 and for Alteromonas sp. MIT1002 upon request. Copies of the arrayed library may be available, depending on supplies. Please direct inquiries to Mary Ann Moran (mmoran@uga.edu).
Visit the Arrayed Mutant Library webpage for more details.
Protocols
Benzoyl-Chloride Derivatization for Dissolved Marine Metabolites (published by Widner et al. 2021)
Data
Digital Microbes
C-CoMP has created digital microbes for Ruegeria pomeroyi DSS-3 and and Alteromonas macleodii MIT1002 that are available for download from the C-CoMP Zenodo Community. Please visit the following resources for more information about C-CoMP digital microbes:
- Preprint: Digital Microbe - A Genome-Informed Data Integration Framework for Collaborative Research on Emerging Model Organisms
- PreLights article - A Genome-Informed Data Integration Framework for Collaborative Research on Emerging Model Organisms
- Digital Microbes project page
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C-CoMP blog post - The Ruegeria pomeroyi DSS-3 digital microbe